I haven't had any major issues like your's but I have noticed that last few days that my Appleplay is glitchy, if I use my phone for a call or respond to text, it won't go back to the radio that was on before, it just sits on appleplay, showing the phone it's connected to, I have to go in and choose the source for it to start playing again and sometimes it will be on a different station then it was before the call.
PhoenixTheBronco OBX, Leather, SAS, High. Blend 8/15, Online 8/26, Built ???, Shipped 11/2, Picked up 11/18